Pseudomonas fluorescens Pf0-1, Pfl01_1186

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_1186
Name
Replicon chromosome
Genomic location 1354131 - 1354838 (- strand)

Cross-References

RefSeq YP_346918.1
GI 77457413
Entrez 3716898
INSDC ABA72929.1
NCBI Locus Tag Pfl01_1186
UniParc UPI00003883F7
UniProtKB Acc Q3KH27
UniProtKB ID Q3KH27_PSEPF
UniRef100 UniRef100_Q3KH27
UniRef50 UniRef50_Q9RPT0
UniRef90 UniRef90_A0A0B7D5Q6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.62
Kyte-Doolittle Hydrophobicity Value -0.170
Molecular Weight (kDa) 26190.8
Isoelectric Point (pI) 5.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002240 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_1186

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA methyltransferase O [Source:HGNC Symbol;Acc:HGNC:30967]
E-value: 9.6e-30
Percent Identity: 44.1

References

No references are associated with this feature.