Pseudomonas fluorescens Pf0-1, Pfl01_2234
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_2234
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2563983 - 2564747 (- strand) |
Cross-References
| RefSeq | YP_347966.1 |
| GI | 77458461 |
| Entrez | 3715653 |
| INSDC | ABA73977.1 |
| NCBI Locus Tag | Pfl01_2234 |
| UniParc | UPI0000388116 |
| UniProtKB Acc | Q3KE29 |
| UniProtKB ID | Q3KE29_PSEPF |
| UniRef100 | UniRef100_Q3KE29 |
| UniRef50 | UniRef50_W6V6D7 |
| UniRef90 | UniRef90_W6V6D7 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Short-chain dehydrogenase/reductase SDR
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.65 |
| Kyte-Doolittle Hydrophobicity Value | 0.159 |
| Molecular Weight (kDa) | 26659.3 |
| Isoelectric Point (pI) | 7.51 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015432 (58 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_2234
Search term: Short-chain dehydrogenase/reductase SDR
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
6.8e-18
Percent Identity:
31.3
|
|
Ensembl
107, assembly
GRCh38.p13
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
6.8e-18
Percent Identity:
31.3
|
References
No references are associated with this feature.