Pseudomonas fluorescens F113, PSF113_4616 (ruvA)

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_4616
Name	ruvA
Replicon	chromosome
Genomic location	5372204 - 5372812 (- strand)

Cross-References

RefSeq	YP_005210000.1
GI	378952512
Entrez	11832719
INSDC	AEV64605.1
NCBI Locus Tag	PSF113_4616
UniParc	UPI00023B3C38
UniProtKB Acc	G8Q7Z9
UniProtKB ID	G8Q7Z9_PSEFL
UniRef100	UniRef100_G8Q7Z9
UniRef50	UniRef50_Q4K7D8
UniRef90	UniRef90_Q4K7D8

Product

Feature Type	CDS
Coding Frame	1
Product Name	protein RuvA
Synonyms
Evidence for Translation
Charge (pH 7)	1.69
Kyte-Doolittle Hydrophobicity Value	-0.037
Molecular Weight (kDa)	22.2
Isoelectric Point (pI)	8.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
7X5A	DNA BINDING PROTEIN/DNA	03/04/22	CryoEM structure of RuvA-Holliday junction complex	Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT	3.01	ELECTRON MICROSCOPY	90.4

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000931 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_4616 Search term: ruvA Search term: protein RuvA

Human Homologs

References