Pseudomonas fluorescens SBW25, PFLU6000 (exbD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25 - Assembly GCF_000009225.2
GCF_000009225.2|latest |
| Locus Tag |
PFLU6000
|
| Name |
exbD
|
| Replicon | chromosome |
| Genomic location | 6555108 - 6555533 (+ strand) |
Cross-References
| RefSeq | YP_002875484.1 |
| GI | 229593365 |
| Entrez | 7817314 |
| INSDC | CAY53534.1 |
| UniParc | UPI00019DB07C |
| UniProtKB Acc | C3K488 |
| UniProtKB ID | C3K488_PSEFS |
| UniRef100 | UniRef100_A0A0C5JTY9 |
| UniRef50 | UniRef50_Q05606 |
| UniRef90 | UniRef90_Q4K3Q7 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
biopolymer transport protein ExbD
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.53 |
| Kyte-Doolittle Hydrophobicity Value | 0.140 |
| Molecular Weight (kDa) | 15.2 |
| Isoelectric Point (pI) | 4.63 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 327 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG017159 (148 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU6000
Search term: exbD
Search term: biopolymer transport protein ExbD
|
Human Homologs
References
No references are associated with this feature.