Pseudomonas putida GB-1, PputGB1_5013

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5013
Name
Replicon chromosome
Genomic location 5598546 - 5599607 (- strand)

Cross-References

RefSeq YP_001671233.1
GI 167036002
EC Number 1.2.1.12
Entrez 5872828
INSDC ABZ00898.1
NCBI Locus Tag PputGB1_5013
UniParc UPI000164C27A
UniProtKB Acc B0KLY8
UniProtKB ID B0KLY8_PSEPG
UniRef100 UniRef100_B0KLY8
UniRef50 UniRef50_Q3ILL8
UniRef90 UniRef90_Q88D63

Product

Feature Type CDS
Coding Frame 1
Product Name
D-erythrose-4-phosphate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -4.38
Kyte-Doolittle Hydrophobicity Value -0.085
Molecular Weight (kDa) 38.6
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 607 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000535 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5013

Human Homologs

Ensembl 110, assembly GRCh38.p14
glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
E-value: 2.8e-65
Percent Identity: 39.4
Ensembl 110, assembly GRCh38.p14
glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
E-value: 2.8e-65
Percent Identity: 39.4
Ensembl 110, assembly GRCh38.p14
glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
E-value: 2.8e-65
Percent Identity: 39.4

References

No references are associated with this feature.