Pseudomonas putida S16, PPS_3055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_3055
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3430570 - 3431454 (+ strand) |
Cross-References
| RefSeq | YP_004702484.1 |
| GI | 339487956 |
| Entrez | 10938687 |
| INSDC | AEJ13604.1 |
| NCBI Locus Tag | PPS_3055 |
| UniParc | UPI000217352B |
| UniProtKB Acc | F8G1M5 |
| UniProtKB ID | F8G1M5_PSEP6 |
| UniRef100 | UniRef100_F8G1M5 |
| UniRef50 | UniRef50_B4EJ01 |
| UniRef90 | UniRef90_B0KPR1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.14 |
| Kyte-Doolittle Hydrophobicity Value | -0.088 |
| Molecular Weight (kDa) | 32557.2 |
| Isoelectric Point (pI) | 7.87 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000789 (471 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_3055
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.