Pseudomonas putida S16, PPS_3170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3170
Name
Replicon chromosome
Genomic location 3560606 - 3560953 (- strand)

Cross-References

RefSeq YP_004702597.1
GI 339488069
Entrez 10938800
NCBI Locus Tag PPS_3170

Product

Feature Type CDS
Coding Frame 1
Product Name
IS111A/IS1328/IS1533/IS116/IS110/IS902, transposase
Synonyms
Evidence for Translation
Charge (pH 7) -0.10
Kyte-Doolittle Hydrophobicity Value -0.123
Molecular Weight (kDa) 13004.8
Isoelectric Point (pI) 6.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 99 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG031429 (6 members)
Putative Inparalogs 1 predicted inparalogs
IS111A/IS1328/IS1533, transposase (PPS_4679) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3170

Human Homologs

References

No references are associated with this feature.