Pseudomonas putida BIRD-1, PPUBIRD1_0642

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0642
Name
Replicon chromosome
Genomic location 726196 - 726882 (- strand)

Cross-References

RefSeq YP_005928537.1
GI 386010260
Entrez 12518872
NCBI Locus Tag PPUBIRD1_0642

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.10
Kyte-Doolittle Hydrophobicity Value 0.004
Molecular Weight (kDa) 24662.2
Isoelectric Point (pI) 5.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 463 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015122 (87 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0642

Human Homologs

References

No references are associated with this feature.