Pseudomonas putida BIRD-1, PPUBIRD1_0651 (rpsT)

Gene Feature Overview

Strain	Pseudomonas putida BIRD-1 GCF_000183645.1|latest
Locus Tag	PPUBIRD1_0651
Name	rpsT
Replicon	chromosome
Genomic location	742536 - 742814 (- strand)

Cross-References

RefSeq	YP_005928546.1
GI	386010269
Entrez	12518886
NCBI Locus Tag	PPUBIRD1_0651

Product

Feature Type	CDS
Coding Frame	1
Product Name	protein RpsT
Synonyms
Evidence for Translation
Charge (pH 7)	15.94
Kyte-Doolittle Hydrophobicity Value	-0.597
Molecular Weight (kDa)	10.1
Isoelectric Point (pI)	11.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6SPF	RIBOSOME	09/01/19	Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate	PSEUDOMONAS AERUGINOSA	2.89	ELECTRON MICROSCOPY	92.9
6SPG	RIBOSOME	09/01/19	Pseudomonas aeruginosa 70s ribosome from a clinical isolate	PSEUDOMONAS AERUGINOSA	3.34	ELECTRON MICROSCOPY	92.9
6SPC	RIBOSOME	09/01/19	Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate	PSEUDOMONAS AERUGINOSA	2.95	ELECTRON MICROSCOPY	92.9
6SPE	RIBOSOME	09/01/19	Pseudomonas aeruginosa 30s ribosome from a clinical isolate	PSEUDOMONAS AERUGINOSA	3.6	ELECTRON MICROSCOPY	92.9

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 508 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004222 (552 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPUBIRD1_0651 Search term: rpsT Search term: protein RpsT

Human Homologs

References