Pseudomonas syringae pv. syringae B728a, Psyr_3858

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_3858
Name
Replicon chromosome
Genomic location 4598394 - 4599353 (+ strand)

Cross-References

RefSeq YP_236926.1
GI 66047085
Entrez 3369393
INSDC AAY38888.1
NCBI Locus Tag Psyr_3858
UniParc UPI000050DA4C
UniProtKB Acc Q4ZPN4
UniProtKB ID Q4ZPN4_PSEU2
UniRef100 UniRef100_Q4ZPN4
UniRef50 UniRef50_Q87XQ4
UniRef90 UniRef90_Q87XQ4

Product

Feature Type CDS
Coding Frame 1
Product Name
nucleoside-specific channel-forming protein, Tsx
Synonyms
Evidence for Translation
Charge (pH 7) -9.60
Kyte-Doolittle Hydrophobicity Value -0.400
Molecular Weight (kDa) 35499.0
Isoelectric Point (pI) 4.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 32 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018574 (101 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3858

Human Homologs

References

No references are associated with this feature.