Pseudomonas syringae pv. syringae B728a, Psyr_4680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_4680
Name
Replicon chromosome
Genomic location 5547340 - 5548176 (+ strand)

Cross-References

RefSeq YP_237745.1
GI 66047904
Entrez 3370230
NCBI Locus Tag Psyr_4680

Product

Feature Type CDS
Coding Frame 1
Product Name
integrase catalytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) 16.64
Kyte-Doolittle Hydrophobicity Value -0.463
Molecular Weight (kDa) 32.2
Isoelectric Point (pI) 10.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 385 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018859 (26 members)
Putative Inparalogs 4 predicted inparalogs
integrase catalytic subunit (Psyr_4616) 100.0% identity
integrase catalytic subunit (Psyr_1176) 100.0% identity
integrase catalytic subunit (Psyr_0592) 100.0% identity
integrase catalytic subunit (Psyr_0273) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4680

Human Homologs

References

No references are associated with this feature.