Pseudomonas syringae pv. tomato DC3000, PSPTO_0478

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0478
NCBI Old Locus TagPSPTO0478
Name
Synonym: PSPTO0478
Replicon chromosome
Genomic location 523823 - 524749 (- strand)

Cross-References

RefSeq NP_790327.1
GI 28867708
Entrez 1182087
INSDC AAO54022.1
NCBI Locus Tag PSPTO_0478
NCBI Old Locus Tag PSPTO0478
UniParc UPI0000008458
UniProtKB Acc Q88AB4
UniProtKB ID Q88AB4_PSESM
UniRef100 UniRef100_Q88AB4
UniRef50 UniRef50_Q88AB4
UniRef90 UniRef90_Q88AB4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.62
Kyte-Doolittle Hydrophobicity Value -0.343
Molecular Weight (kDa) 34.9
Isoelectric Point (pI) 5.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 13 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017274 (21 members)
Putative Inparalogs 1 predicted inparalogs
hypothetical protein (PSPTO_3775) 90.3% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0478

Human Homologs

References

No references are associated with this feature.