Pseudomonas syringae pv. tomato DC3000, PSPTO_2349

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_2349
NCBI Old Locus TagPSPTO2349
Name
Synonym: PSPTO2349
Replicon chromosome
Genomic location 2604859 - 2605749 (+ strand)

Cross-References

RefSeq YP_001740051.1
GI 170660221
Entrez 1184000
INSDC ACB22027.1
NCBI Locus Tag PSPTO_2349
NCBI Old Locus Tag PSPTO2349
UniParc UPI000170CD81
UniProtKB Acc B1GRK0
UniProtKB ID B1GRK0_PSESM
UniRef100 UniRef100_B1GRK0
UniRef50 UniRef50_Q4K8W8
UniRef90 UniRef90_B1GRK0

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA pseudouridine synthase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.23
Kyte-Doolittle Hydrophobicity Value -0.339
Molecular Weight (kDa) 33.8
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 560 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003402 (543 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2349

Human Homologs

Ensembl 97, assembly GRCh38.p12
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value: 2.8e-14
Percent Identity: 29.6
Ensembl 97, assembly GRCh38.p12
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value: 2.8e-14
Percent Identity: 29.6

References

No references are associated with this feature.