Pseudomonas sp. UW4, PputUW4_00398 (rfaC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00398
Name
rfaC
Replicon chromosome
Genomic location 457332 - 458393 (+ strand)

Cross-References

RefSeq YP_007027411.1
GI 426407312
EC Number 2.4.1.-
Entrez 14052668
INSDC AFY17606.1
NCBI Locus Tag PputUW4_00398
UniParc UPI0002703372
UniProtKB Acc K9NC22
UniProtKB ID K9NC22_9PSED
UniRef100 UniRef100_K9NC22
UniRef50 UniRef50_P24173
UniRef90 UniRef90_K9NC22

Product

Feature Type CDS
Coding Frame 1
Product Name
lipopolysaccharide heptosyltransferase I
Synonyms
Evidence for Translation
Charge (pH 7) 18.77
Kyte-Doolittle Hydrophobicity Value -0.125
Molecular Weight (kDa) 39.3
Isoelectric Point (pI) 10.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004618 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00398
Search term: rfaC

Human Homologs

References

No references are associated with this feature.