Pseudomonas protegens Pf-5, PFL_0508 (aceF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0508
Name
aceF
Replicon chromosome
Genomic location 589186 - 591135 (- strand)

Cross-References

RefSeq YP_257652.1
GI 70734012
EC Number 2.3.1.12
Entrez 3481099
INSDC AAY95917.1
NCBI Locus Tag PFL_0508
UniParc UPI000054CD51
UniProtKB Acc Q4KJD1
UniProtKB ID Q4KJD1_PSEF5
UniRef100 UniRef100_Q4KJD1
UniRef50 UniRef50_P10802
UniRef90 UniRef90_K9NDB5

Product

Feature Type CDS
Coding Frame 1
Product Name
pyruvate dehydrogenase dihydrolipoyltransacetylase
Synonyms
Evidence for Translation
Charge (pH 7) -10.85
Kyte-Doolittle Hydrophobicity Value 0.207
Molecular Weight (kDa) 65.7
Isoelectric Point (pI) 5.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 523 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004623 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0508
Search term: aceF

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydrolipoamide branched chain transacylase E2 [Source:HGNC Symbol;Acc:HGNC:2698]
E-value: 6.5e-36
Percent Identity: 30.8

References

No references are associated with this feature.