Pseudomonas protegens Pf-5, PFL_3469
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
| Locus Tag |
PFL_3469
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3986161 - 3987201 (- strand) |
Cross-References
| RefSeq | YP_260572.2 |
| GI | 346643019 |
| Entrez | 3475503 |
| INSDC | AAY92736.2 |
| NCBI Locus Tag | PFL_3469 |
| UniParc | UPI000219FF9A |
| UniProtKB Acc | Q4KB11 |
| UniProtKB ID | Q4KB11_PSEF5 |
| UniRef100 | UniRef100_Q4KB11 |
| UniRef50 | UniRef50_I3UHC8 |
| UniRef90 | UniRef90_Q4KB11 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter substrate-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.64 |
| Kyte-Doolittle Hydrophobicity Value | -0.131 |
| Molecular Weight (kDa) | 38.1 |
| Isoelectric Point (pI) | 5.22 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000221 (363 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_3469
Search term: ABC transporter substrate-binding protein
|
Human Homologs
References
No references are associated with this feature.