Pseudomonas protegens Pf-5, PFL_6077 (tagT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6077
Name
tagT
Replicon chromosome
Genomic location 6899122 - 6899838 (- strand)

Cross-References

RefSeq YP_263135.1
GI 70733360
Entrez 3480447
INSDC AAY95265.1
NCBI Locus Tag PFL_6077
UniParc UPI000054E274
UniProtKB Acc Q4K3P8
UniProtKB ID Q4K3P8_PSEF5
UniRef100 UniRef100_Q4K3P8
UniRef50 UniRef50_G8Q706
UniRef90 UniRef90_Q4K3P8

Product

Feature Type CDS
Coding Frame 1
Product Name
Lol-like lipoprotein-translocating system, ATP-binding protein TagT
Synonyms
Evidence for Translation
Charge (pH 7) 6.25
Kyte-Doolittle Hydrophobicity Value -0.059
Molecular Weight (kDa) 25.6
Isoelectric Point (pI) 8.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6077
Search term: tagT

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.1e-10
Percent Identity: 31.2
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.1e-10
Percent Identity: 31.2
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.1e-10
Percent Identity: 31.2

References

No references are associated with this feature.