Pseudomonas protegens Pf-5, PFL_1330 (emhC)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1330
Name	emhC
Replicon	chromosome
Genomic location	1504150 - 1505610 (- strand)

Cross-References

RefSeq	YP_258459.1
GI	70728710
Entrez	3478149
INSDC	AAY90615.1
NCBI Locus Tag	PFL_1330
UniParc	UPI000054D075
UniProtKB Acc	Q4KH24
UniProtKB ID	Q4KH24_PSEF5
UniRef100	UniRef100_Q4KH24
UniRef50	UniRef50_Q9WWZ8
UniRef90	UniRef90_Q4KH24

Product

Feature Type	CDS
Coding Frame	1
Product Name	efflux transporter, outer membrane factor lipoprotein EmhC
Synonyms
Evidence for Translation
Charge (pH 7)	-2.54
Kyte-Doolittle Hydrophobicity Value	-0.272
Molecular Weight (kDa)	53005.7
Isoelectric Point (pI)	5.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000418 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1330 Search term: emhC Search term: efflux transporter, outer membrane factor lipoprotein EmhC

Human Homologs

References