Strain |
Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest |
Locus Tag |
PFLCHA0_c21340
|
Name |
rtcB1
|
Replicon | chromosome |
Genomic location | 2353319 - 2354452 (- strand) |
RefSeq | YP_007999410.1 |
GI | 501679584 |
Entrez | 15560050 |
NCBI Locus Tag | PFLCHA0_c21340 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RtcB protein RtcB
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 2.67 |
Kyte-Doolittle Hydrophobicity Value | -0.257 |
Molecular Weight (kDa) | 41230.5 |
Isoelectric Point (pI) | 7.46 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 339 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005013 (313 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c21340
Search term: rtcB1
Search term: RtcB protein RtcB
|
Ensembl
110, assembly
GRCh38.p14
|
RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
E-value:
7.9e-26
Percent Identity:
26.2
|