Pseudomonas protegens Pf-5, PFL_1330 (emhC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1330
Name
emhC
Replicon chromosome
Genomic location 1504150 - 1505610 (- strand)

Cross-References

RefSeq YP_258459.1
GI 70728710
Entrez 3478149
INSDC AAY90615.1
NCBI Locus Tag PFL_1330
UniParc UPI000054D075
UniProtKB Acc Q4KH24
UniProtKB ID Q4KH24_PSEF5
UniRef100 UniRef100_Q4KH24
UniRef50 UniRef50_Q9WWZ8
UniRef90 UniRef90_Q4KH24

Product

Feature Type CDS
Coding Frame 1
Product Name
efflux transporter, outer membrane factor lipoprotein EmhC
Synonyms
Evidence for Translation
Charge (pH 7) -2.54
Kyte-Doolittle Hydrophobicity Value -0.272
Molecular Weight (kDa) 53005.7
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000418 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1330
Search term: emhC

Human Homologs

References

No references are associated with this feature.